Dissection of a rapidly evolving wheat resistance gene cluster by long-read genome sequencing accelerated the cloning of Pm69
文献类型: 外文期刊
作者: Li, Yinghui 1 ; Wei, Zhen-Zhen 1 ; Sela, Hanan 1 ; Govta, Liubov 1 ; Klymiuk, Valentyna 1 ; Roychowdhury, Rajib 1 ; Chawla, Harmeet Singh 4 ; Ens, Jennifer 4 ; Wiebe, Krystalee 4 ; Bocharova, Valeria 1 ; Ben-David, Roi 1 ; Pawar, Prerna B. 1 ; Zhang, Yuqi 7 ; Jaiwar, Samidha 1 ; Molnar, Istvan 8 ; Dolezel, Jaroslav 8 ; Coaker, Gitta 9 ; Pozniak, Curtis J. 4 ; Fahima, Tzion 1 ;
作者机构: 1.Univ Haifa, Inst Evolut, IL-3498838 Haifa, Israel
2.Univ Haifa, Dept Evolutionary & Environm Biol, IL-3498838 Haifa, Israel
3.Sichuan Acad Agr Sci, Inst Plant Protect, Chengdu 610066, Peoples R China
4.Univ Saskatchewan, Crop Dev Ctr, 51 Campus Dr, Saskatoon, SK S7N 5A8, Canada
5.Univ Saskatchewan, Dept Plant Sci, 51 Campus Dr, Saskatoon, SK S7N 5A8, Canada
6.Agr Res Org ARO, Dept Vegetables, Inst Plant Sci, Volcani Ctr, IL-7505101 Rishon Leziyyon, Israel
7.China Agr Univ, Dept Crop Genom & Bioinformat, Beijing 100094, Peoples R China
8.Czech Acad Sci, Ctr Reg Hana Biotechnol & Agr Res, Inst Expt Bot, Slechtitel U 31, Olomouc 77900, Czech Republic
9.Univ Calif Davis, Plant Pathol Dept, Davis, CA 95616 USA
10.Univ Manitoba, Dept Plant Sci, Winnipeg, MB R3T 2N2, Canada
11.ELKH, Ctr Agr Res, Agr Inst, Martonvasar, Hungary
期刊名称:PLANT COMMUNICATIONS ( 影响因子:10.5; 五年影响因子:10.5 )
ISSN: 2590-3462
年卷期: 2024 年 5 卷 1 期
页码:
收录情况: SCI
摘要: Gene cloning in repeat-rich polyploid genomes remains challenging. Here, we describe a strategy for overcoming major bottlenecks in cloning of the powdery mildew resistance gene (R-gene) Pm69 derived from tetraploid wild emmer wheat. A conventional positional cloning approach was not effective owing to suppressed recombination. Chromosome sorting was compromised by insufficient purity. A Pm69 physical map, constructed by assembling Oxford Nanopore Technology (ONT) long-read genome sequences, revealed a rapidly evolving nucleotide-binding leucine-rich repeat (NLR) R-gene cluster with structural variations. A single candidate NLR was identified by anchoring RNA sequencing reads from susceptible mutants to ONT contigs and was validated by virus-induced gene silencing. Pm69 is likely a newly evolved NLR and was discovered in only one location across the wild emmer wheat distribution range in Israel. Pm69 was successfully introgressed into cultivated wheat, and a diagnostic molecular marker was used to accelerate its deployment and pyramiding with other R-genes.
- 相关文献
作者其他论文 更多>>
-
Intracellular Reactive Oxygen Species-Aided Localized Cell Death Contributing to Immune Responses Against Wheat Powdery Mildew Pathogen
作者:Li, Yinghui;Roychowdhury, Rajib;Govta, Liubov;Jaiwar, Samidha;Wei, Zhen-Zhen;Shams, Imad;Fahima, Tzion;Li, Yinghui;Roychowdhury, Rajib;Govta, Liubov;Jaiwar, Samidha;Shams, Imad;Fahima, Tzion;Wei, Zhen-Zhen
关键词:cell death; hypersensitive response; powdery mildew; reactive oxygen species; wheat
-
Haplotype Analysis Sheds Light on the Genetic Evolution of the Powdery Mildew Resistance Locus Pm60 in Triticum Species
作者:Huang, Xuhui;Jin, Xueli;Ren, Xiaojie;Wu, Wenxuan;Ji, Wenjun;Jiang, Bo;Hao, Ming;Ning, Shunzong;Yuan, Zhongwei;Wu, Bihua;Liu, Dengcai;Huang, Lin;Ren, Xiaojie;Wei, Zhen-Zhen;Feng, Lihua;Zhang, Lianquan;Wei, Zhen-Zhen
关键词:wheat powdery mildew; Pm60; allelic variants; domesticated wheat
-
Distribution and Nucleotide Diversity of Yr15 in Wild Emmer Populations and Chinese Wheat Germplasm
作者:He, Yu;Zhang, Lianquan;Wang, Jirui;Chen, Guoyue;Wu, Bihua;Liu, Dengcai;Huang, Lin;He, Yu;Jiang, Yun;Zhang, Lianquan;Wang, Jirui;Chen, Guoyue;Wu, Bihua;Liu, Dengcai;Huang, Lin;Feng, Lihua;Jiang, Yun;Yan, Jun;Zhao, Gang;Fahima, Tzion
关键词:stripe rust resistance; Yr15; nucleotide diversity; wild emmer populations; Chinese wheat germplasm
-
Sequence divergence between spelt and common wheat
作者:Stiller, Jiri;Manners, John M.;Liu, Chunji;Liu, Miao;Liu, Miao;Liu, Dengcai;Zhao, Qiang;Qi, Feng;Tang, Shican;Miao, Jiashun;Han, Bin;Vrana, Jan;Holusova, Katerina;Dolezel, Jaroslav
关键词:
-
Loci and candidate gene identification for resistance to Sclerotinia sclerotiorum in soybean (Glycine max L. Merr.) via association and linkage maps
作者:Han, Yingpeng;Sun, Mingming;Zhao, Yue;Lv, Chunmei;Li, Dongmei;Teng, Weili;Li, Wenbin;Li, Yinghui;Qiu, Lijuan;Liu, Dongyuan;Yang, Zhijiang;Huang, Long;Zheng, Hongkun;Sun, Mingming;Lv, Chunmei
关键词:soybean white mold;Sclerotinia sclerotiorum;QTL mapping;GWA mapping;resistance genes;stem pigmentation




