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Distribution and Nucleotide Diversity of Yr15 in Wild Emmer Populations and Chinese Wheat Germplasm

文献类型： 外文期刊

作者： He, Yu 1 ; Feng, Lihua 3 ; Jiang, Yun 2 ; Zhang, Lianquan 1 ; Yan, Jun 5 ; Zhao, Gang 5 ; Wang, Jirui 1 ; Chen, Guoyue 1 ; W 1 ;

作者机构： 1.Sichuan Agr Univ, State Key Lab Crop Gene Explorat & Utilizat South, Wenjiang 611130, Peoples R China

2.Sichuan Agr Univ, Triticeae Res Inst, Wenjiang 611130, Peoples R China

3.Sichuan Agr Univ, Coll Agron, Wenjiang 611130, Peoples R China

4.Sichuan Acad Agr Sci, Biotechnol & Nucl Technol Res Inst, Chengdu 610061, Peoples R China

5.Chengdu Univ, Sch Pharm & Bioengn, Key Lab Coarse Cereal Proc, Minist Agr, Chengdu 610106, Peoples R China

6.Univ Haifa, Inst Evolut, 199 Abba Hushi Ave, IL-3498838 Haifa, Israel

关键词： stripe rust resistance; Yr15; nucleotide diversity; wild emmer populations; Chinese wheat germplasm

期刊名称：PATHOGENS （ 影响因子：3.492； 五年影响因子：4.066 ）

ISSN：

年卷期： 2020 年 9 卷 3 期

页码：

收录情况： SCI

摘要： Stripe rust, caused by Puccinia striiformis f. sp. tritici (Pst), is a devastating fungal disease of wheat. The wild emmer gene, Yr15 (Wtk1), which confers a strong broad-spectrum resistance to Pst isolates, is composed of kinase and pseudokinase domains. The analysis of 361 wild emmer accessions from a wide range of natural habitats confirms that functional Wtk1 is distributed mainly along a narrow axis from Mt. Carmel to Mt. Hermon regions, in the northern part of Israel, where environmental conditions are favorable to the onset of stripe rust. An analysis of full-length Wtk1 DNA sequences from 49 wild emmer accessions identified three haplotypes and extremely low nucleotide diversity (pi = 0.00002). The sequence diversity of Wtk1 is 9.5 times lower than that of broad-spectrum partial resistance gene Yr36 (pi = 0.00019), and both are in sharp contrast to the high level of nucleotide diversity previously reported for race-specific resistance genes (e.g., Lr10 and Pm3). However, the nonfunctional wtk1 sequences possess high level of nucleotide diversity (pi = 0.07). These results may reflect the different resistance mechanisms and the different evolutionary processes that shaped these resistance genes. Yr15 was absent in 189 Chinese wheat landraces and was present in only 1.02% of the 583 tested modern Chinese wheat cultivars. These results corroborate our previous results showing that Yr15 was absent in 94% of a worldwide collection of 513 wheat cultivars, therefore indicating the importance of Yr15 in wheat stripe rust resistance breeding programs in China and elsewhere around the globe.

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