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Genomic characterization and phylogenetic analysis of the novel Pseudomonas phage PPSC2

文献类型: 外文期刊

作者: Wu, Xiang 3 ; Wu, Yongfeng 2 ; Tang, Ya 1 ; Gan, Bingcheng 3 ;

作者机构: 1.Sichuan Univ, Coll Architecture & Environm, 24 South Sect 1st Ring Rd, Chengdu 610065, Sichuan, Peoples R China

2.Sichuan Prov Transport Dept Highway Planning Surv, Design & Res Inst, Chengdu 610041, Peoples R China

3.Sichuan Acad Agr Sci, Soil & Fertilizer Inst, Chengdu 610066, Peoples R China

期刊名称:ARCHIVES OF VIROLOGY ( 影响因子:2.574; 五年影响因子:2.466 )

ISSN: 0304-8608

年卷期: 2018 年 163 卷 7 期

页码:

收录情况: SCI

摘要: We isolated a Pseudomonas phage infecting Pseudomonas fluorescens SA1 separated from a soil sample collected in Sichuan Province, China. This phage, which we named PPSC2, has a genome that is composed of a 97,330-bp-long linear double-stranded DNA with 47.51% G+C content and 168 putative protein-coding genes. We identified 20 tRNA genes in the genome of PPSC2, and the tRNA GC content ranged from 44.2% to 58.4%. Phylogenetic and BLASTn analysis revealed that the Pseudomonas phage PPSC2 should be considered a new member of the family Myoviridae.

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